if you start the motor with crap sitting on top of the piston it may damage the head / bores / rings etc - in other words, the motor.
IIRC getting the heads off isn't that difficult. Do you have a workshop manual for it? That should give you the details you need. The only thing is if you're going to do that you may as well rebuild it depending on what you find.
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Whats the overall plan? Get the bike rideable ASAP with minimal work and rebuild later or rebuild the bike from the ground up - a full restore job?
Possible costly option - give it a go and see if it starts. If it starts and runs then run it for 15 minutes (you've checked for coolant in the radiator before starting it haven't you?) then drain the oil. Use a magnet to go thru the oil and see if any metal fragments come out or filter it slowly thru a coffee filter. Fragments = problems. Mayonnaise = problems. Clean = good - move to next phase.
Costly option - drop the motor out and rebuild it - you then know you have a rebuilt and hopefully reliable motor.
This is just my opinion and may be completely off base or cause more damage - as before there are way more knowledgeable people here (once they're back from PI) who will have better advice.
Just a thought tho - instead of multiple threads just try to keep it to one so everyone can follow without jumping from thread to thread