From FX site, last round at EC - Both from 1st race Sunday
FX 600
2 Kevin CURTAIN (NSW) 1:40.739 1:35.608 1:35.385 1:35.714 1:35.770 1:35.576 1:35.602
FX1000
1 Kevin CURTAIN (NSW) 1:39.047 1:33.763 1:33.839 1:34.216 1:34.121 1:34.890 1:35.249
Considering theres a few more mods allowed in FX1000 (ex, full sytems and aftermarket shocks) than there is in the FX600's I reckon theres not a lot in it..

But extra weight will slow the 600's down more than it will a 1000..
OH, and don't forget this guy...
FX 600 EC middle of this year.
18 67 D Russell HAFEY (NSW) / Bakers Delight / The Art Of Façade Kawasaki ZX6R 7 11:53.165 29.097 1:39.802 5
FX1000 EC last race, last year.
16 66 D Russell HAFEY (NSW) / Bakers Delight / The Art Of Façade Kawasaki ZX10R 7 11:58.619 45.593 1:40.948 4
anyway's - back on topic... Get a 600...
Dave
2010 Z1000
ex bikes
05 ZX-10R Race Bike - No.77
95 ZXR750R M Race Bike - No. 75
98 ZX9R Race Bike - No. 000
zx6r, zx7r, GPX750, GPX500, lots of KX's.

I ride way too fast to worry about cholesterol